| Gene |
Chromosome |
Location |
Syndrome |
| ABCB1 | 7 | q21.12 | Ulcerative colitis |
| ADAM17 | 2 | p25.1 | Crohn Disease |
| AP3B1 | 5 | q14.1 | Hermansky-Pudlak syndrome |
| AP3D1 | 19 | p13.3 | Hermansky-Pudlak syndrome |
| ATG16L1 | 2 | q37.1 | Crohn Disease |
| BLOC1S3 | 19 | q13.32 | Hermansky-Pudlak syndrome |
| BLOC1S6 | 15 | q21.1 | Hermansky-Pudlak syndrome |
| BTNL2 | 6 | p21.32 | Ulcerative colitis |
| DTNBP1 | 6 | p22.3 | Hermansky-Pudlak syndrome |
| FGFR1OP | 6 | q27 | Crohn Disease |
| HLA-DRB1 | 6 | p21.32 | Crohn Disease |
| HP | 16 | q22.2 | Crohn Disease |
| HPS1 | 10 | q24.2 | Hermansky-Pudlak syndrome |
| HPS3 | 3 | q24 | Hermansky-Pudlak syndrome |
| HPS4 | 22 | q12.1 | Hermansky-Pudlak syndrome |
| HPS5 | 11 | p15.1 | Hermansky-Pudlak syndrome |
| HPS6 | 10 | q24.32 | Hermansky-Pudlak syndrome |
| IL10 | 1 | q32.1 | Crohn Disease |
| IL10RA | 11 | q23.3 | Ulcerative colitis |
| IL10RB | 21 | q22.11 | Ulcerative colitis |
| IL12B | 5 | q33.3 | Crohn Disease |
| IL2 | 4 | q27 | Ulcerative colitis |
| IL23R | 1 | p31.3 | Ulcerative colitis |
| IL23R | 1 | p31.3 | Crohn Disease |
| IRF5 | 7 | q32.1 | Ulcerative colitis |
| IRGM | 5 | q33.1 | Crohn Disease |
| JAK2 | 9 | p24.1 | Crohn Disease |
| LACC1 | 13 | q14.11 | Ulcerative colitis |
| LACC1 | 13 | q14.11 | Crohn Disease |
| LRRK2 | 12 | q12 | Crohn Disease |
| MUC2 | 11 | p15.5 | Ulcerative colitis |
| MUC2 | 11 | p15.5 | Crohn Disease |
| MYO9B | 19 | p13.11 | Ulcerative colitis |
| NOD2 | 16 | q12.1 | Crohn Disease |
| PTPN2 | 18 | p11.21 | Ulcerative colitis |
| REL | 2 | p16.1 | Ulcerative colitis |
| SLC11A1 | 2 | q35 | Crohn Disease |
| SLC22A4 | 5 | q31.1 | Crohn Disease |
| SLC22A5 | 5 | q31.1 | Crohn Disease |
| STAT3 | 17 | q21.2 | Crohn Disease |
| TPMT | 6 | p22.3 | Crohn Disease |
| TYK2 | 19 | p13.2 | Crohn Disease |